open source tool Search Results


free and open-source software tool  (FOSS GmbH)
90
FOSS GmbH free and open-source software tool
Free And Open Source Software Tool, supplied by FOSS GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc10834440-243-10-12?v=FOSS+GmbH
Average 90 stars, based on 1 article reviews
free and open-source software tool - by Bioz Stars, 2026-08
90/100 stars
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open source tool rstudio version february 1, 1335  (RStudio)
90
RStudio open source tool rstudio version february 1, 1335
Open Source Tool Rstudio Version February 1, 1335, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc08695969-120-13-15?v=RStudio
Average 90 stars, based on 1 article reviews
open source tool rstudio version february 1, 1335 - by Bioz Stars, 2026-08
90/100 stars
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open-source bioinformatics tool  (MolBio Diagnostics)
90
MolBio Diagnostics open-source bioinformatics tool
Open Source Bioinformatics Tool, supplied by MolBio Diagnostics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pm36652461-87-12-17?v=MolBio+Diagnostics
Average 90 stars, based on 1 article reviews
open-source bioinformatics tool - by Bioz Stars, 2026-08
90/100 stars
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open-source tool  (RStudio)
90
RStudio open-source tool
Open Source Tool, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc08794188-64-8-11?v=RStudio
Average 90 stars, based on 1 article reviews
open-source tool - by Bioz Stars, 2026-08
90/100 stars
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thermobar v.1.0.42  (Wieser GmbH)
90
Wieser GmbH thermobar v.1.0.42
Thermobar V.1.0.42, supplied by Wieser GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/10__1093_slash_petrology_slash_egae089-159-30-35?v=Wieser+GmbH
Average 90 stars, based on 1 article reviews
thermobar v.1.0.42 - by Bioz Stars, 2026-08
90/100 stars
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open-source tool  (St Agnes HealthCare Inc)
90
St Agnes HealthCare Inc open-source tool
Open Source Tool, supplied by St Agnes HealthCare Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc02359512-47-10-13?v=St+Agnes+HealthCare+Inc
Average 90 stars, based on 1 article reviews
open-source tool - by Bioz Stars, 2026-08
90/100 stars
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open-source compiler and pcb synthesis tool for digital microfluidic biochips  (Samsung Research America Inc)
90
Samsung Research America Inc open-source compiler and pcb synthesis tool for digital microfluidic biochips
Open Source Compiler And Pcb Synthesis Tool For Digital Microfluidic Biochips, supplied by Samsung Research America Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/10__1016_slash_j__vlsi__2015__01__004-4-9-68?v=Samsung+Research+America+Inc
Average 90 stars, based on 1 article reviews
open-source compiler and pcb synthesis tool for digital microfluidic biochips - by Bioz Stars, 2026-08
90/100 stars
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open-source tool  (MedCalc Software Ltd)
90
MedCalc Software Ltd open-source tool
Open Source Tool, supplied by MedCalc Software Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc10448299__jamanetwopen___e2330617___s001-172-13-15?v=MedCalc+Software+Ltd
Average 90 stars, based on 1 article reviews
open-source tool - by Bioz Stars, 2026-08
90/100 stars
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neuroarchiver tool  (Open Source Instruments Inc)
90
Open Source Instruments Inc neuroarchiver tool
Neuroarchiver Tool, supplied by Open Source Instruments Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc06420604-211-25-27?v=Open+Source+Instruments+Inc
Average 90 stars, based on 1 article reviews
neuroarchiver tool - by Bioz Stars, 2026-08
90/100 stars
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open source tool  (Sasquatch Software Corporation)
90
Sasquatch Software Corporation open source tool
Open Source Tool, supplied by Sasquatch Software Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pm40347797-9-8-10?v=Sasquatch+Software+Corporation
Average 90 stars, based on 1 article reviews
open source tool - by Bioz Stars, 2026-08
90/100 stars
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profed open-source online tool  (RStudio)
90
RStudio profed open-source online tool
(A) Illustration of sample annotation and basic profile filter parameters. Shading indicates that additional replicates are optional. FC = fold change. (B) Screen-shot from the <t>ProFED</t> online tool showing the “slider” panel used to set fold change thresholds and limits of desired hit profiles. The depicted setting filters for targets specific to condition a . (C) Exemplary read count profiles of hits specific to condition a (A673; top panel) and b (HEK293; bottom panel) as generated by ProFED. (D) STRING analysis of reported and predicted protein-protein interactions among condition a (A673)-specific hits. 13 hits filtered with a stringent ProFED profile were analyzed in comparison to 28 hits based on a more open hit profile ( plus ). Line thickness indicates the strength of data support.
Profed Open Source Online Tool, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc05792015-334-13-25?v=RStudio
Average 90 stars, based on 1 article reviews
profed open-source online tool - by Bioz Stars, 2026-08
90/100 stars
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igor-based open-source pmf evaluation tool (pet)  (wavemetrics inc)
90
wavemetrics inc igor-based open-source pmf evaluation tool (pet)
(A) Illustration of sample annotation and basic profile filter parameters. Shading indicates that additional replicates are optional. FC = fold change. (B) Screen-shot from the <t>ProFED</t> online tool showing the “slider” panel used to set fold change thresholds and limits of desired hit profiles. The depicted setting filters for targets specific to condition a . (C) Exemplary read count profiles of hits specific to condition a (A673; top panel) and b (HEK293; bottom panel) as generated by ProFED. (D) STRING analysis of reported and predicted protein-protein interactions among condition a (A673)-specific hits. 13 hits filtered with a stringent ProFED profile were analyzed in comparison to 28 hits based on a more open hit profile ( plus ). Line thickness indicates the strength of data support.
Igor Based Open Source Pmf Evaluation Tool (Pet), supplied by wavemetrics inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/open+source+tool/pmc03217143-159-10-9?v=wavemetrics+inc
Average 90 stars, based on 1 article reviews
igor-based open-source pmf evaluation tool (pet) - by Bioz Stars, 2026-08
90/100 stars
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Image Search Results


(A) Illustration of sample annotation and basic profile filter parameters. Shading indicates that additional replicates are optional. FC = fold change. (B) Screen-shot from the ProFED online tool showing the “slider” panel used to set fold change thresholds and limits of desired hit profiles. The depicted setting filters for targets specific to condition a . (C) Exemplary read count profiles of hits specific to condition a (A673; top panel) and b (HEK293; bottom panel) as generated by ProFED. (D) STRING analysis of reported and predicted protein-protein interactions among condition a (A673)-specific hits. 13 hits filtered with a stringent ProFED profile were analyzed in comparison to 28 hits based on a more open hit profile ( plus ). Line thickness indicates the strength of data support.

Journal: PLoS ONE

Article Title: Target discovery screens using pooled shRNA libraries and next-generation sequencing: A model workflow and analytical algorithm

doi: 10.1371/journal.pone.0191570

Figure Lengend Snippet: (A) Illustration of sample annotation and basic profile filter parameters. Shading indicates that additional replicates are optional. FC = fold change. (B) Screen-shot from the ProFED online tool showing the “slider” panel used to set fold change thresholds and limits of desired hit profiles. The depicted setting filters for targets specific to condition a . (C) Exemplary read count profiles of hits specific to condition a (A673; top panel) and b (HEK293; bottom panel) as generated by ProFED. (D) STRING analysis of reported and predicted protein-protein interactions among condition a (A673)-specific hits. 13 hits filtered with a stringent ProFED profile were analyzed in comparison to 28 hits based on a more open hit profile ( plus ). Line thickness indicates the strength of data support.

Article Snippet: To filter shRNAs for hits according to fold change profiles, we created the ProFED open-source online tool using RShiny, a web application for R ( http://shiny.rstudio.com/ ).

Techniques: Generated, Protein-Protein interactions, Comparison

Screen hits specific to the A673 cell line (condition a ) as filtered using ProFED.

Journal: PLoS ONE

Article Title: Target discovery screens using pooled shRNA libraries and next-generation sequencing: A model workflow and analytical algorithm

doi: 10.1371/journal.pone.0191570

Figure Lengend Snippet: Screen hits specific to the A673 cell line (condition a ) as filtered using ProFED.

Article Snippet: To filter shRNAs for hits according to fold change profiles, we created the ProFED open-source online tool using RShiny, a web application for R ( http://shiny.rstudio.com/ ).

Techniques: Binding Assay

Enriched gene ontologies of A673 (condition a )-specific hits.

Journal: PLoS ONE

Article Title: Target discovery screens using pooled shRNA libraries and next-generation sequencing: A model workflow and analytical algorithm

doi: 10.1371/journal.pone.0191570

Figure Lengend Snippet: Enriched gene ontologies of A673 (condition a )-specific hits.

Article Snippet: To filter shRNAs for hits according to fold change profiles, we created the ProFED open-source online tool using RShiny, a web application for R ( http://shiny.rstudio.com/ ).

Techniques: Phospho-proteomics, Transduction